MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

About PDBj

PDBj (Protein Data Bank Japan) maintains the single global PDB/BMRB/EMDB archives of macromolecular structures and provide integrated tools, under the Joint Usage and Research activities of the Institute for Protein Research. The database is supported by JST-NBDC (JPMJND2205) and AMED-BINDS. PDBj's logo design incorporates cytochrome c (PDBID: 1cyc), which was the first structure determined in Japan.

Notice of Service Suspend (PDBj main site and format conversion service, OneDep deposition service at PDBj/PDBc )

Due to system maintenance, we will suspend the PDBj main site (pdbj.org), format conversion service and OneDep Deposition service at PDBj/PDBc during the following period:

  • 4 March 2024 (Mon) (JST=UTC+9) 1 p.m. - 2 p.m.: for five or ten minute
  • 8 March 2024 (Fri) (JST=UTC+9) 7 p.m. - 8 p.m.: during this period

Please avoid using them during this period. We are sorry for your inconvenience.

This maintenance will not affect the other services on different subdomains such as PDBj Numon (numon.pdbj.org) and PDB Archive (files.pdbj.org) download service, except for the format conversion service.

Find the service you need

Choose a keyword listed below or input keywords into the textbox at the right of the keyword list. The brief explanation of the matched services will be displayed.
  • Click the 'Show all services' button to display the explanation for all services.
  • Input some keywords into the 'Word Search Box' to narrow down the search results.


PDB entries from 2024-02-28

PDB statisticsPDBj update infoContact PDBjnumon